Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-3 | SAMN04487831_101281 | Not Available | Negative | 283574 - 284134 | 20942.5 |
| hypothetical protein | SAMN04487831_101282 | Not Available | Negative | 284274 - 285089 | 30391.8 |
| polyphosphate kinase | SAMN04487831_101283 | Not Available | Negative | 285082 - 287244 | 82075.4 |
| exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SAMN04487831_101284 | Not Available | Negative | 287259 - 288674 | 53135.9 |
| chorismate mutase / prephenate dehydratase | SAMN04487831_101285 | Not Available | Negative | 288694 - 289830 | 43028.0 |
| protein of unknown function | SAMN04487831_101286 | Not Available | Negative | 289860 - 290882 | 38294.2 |
| dna polymerase-3 subunit alpha | SAMN04487831_101287 | Not Available | Negative | 290922 - 295370 | 167302.0 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | SAMN04487831_101288 | Not Available | Negative | 295392 - 296441 | 36894.3 |
| regulator of sigma e protease | SAMN04487831_101289 | Not Available | Negative | 296456 - 297502 | 38484.4 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | SAMN04487831_101290 | Not Available | Negative | 297496 - 298644 | 41752.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
