Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa domain (dynein-related subfamily) | SAMN04487831_11730 | Not Available | Positive | 3133095 - 3133841 | 29118.9 |
| mcrbc 5-methylcytosine restriction system component | SAMN04487831_11731 | Not Available | Positive | 3133838 - 3134221 | 14651.9 |
| mcrbc 5-methylcytosine restriction system component | SAMN04487831_11732 | Not Available | Positive | 3134376 - 3134876 | 19687.4 |
| hypothetical protein | SAMN04487831_11733 | Not Available | Positive | 3134915 - 3135760 | 31352.1 |
| aaa domain (cdc48 subfamily) | SAMN04487831_11734 | Not Available | Positive | 3135785 - 3136969 | 45645.3 |
| hnh endonuclease | SAMN04487831_11735 | Not Available | Positive | 3137065 - 3138132 | 41156.0 |
| hypothetical protein | SAMN04487831_11736 | Not Available | Positive | 3138357 - 3138620 | 9907.63 |
| hypothetical protein | SAMN04487831_11737 | Not Available | Positive | 3138639 - 3138761 | 4639.99 |
| hypothetical protein | SAMN04487831_11738 | Not Available | Positive | 3138996 - 3139265 | 10310.1 |
| hypothetical protein | SAMN04487831_11739 | Not Available | Positive | 3139283 - 3139405 | 4588.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
