Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| relaxase/mobilisation nuclease domain-containing protein | SAMN04487831_11720 | Not Available | Positive | 3124844 - 3126007 | 45780.1 |
| dna-binding protein spovg, cell septation regulator | SAMN04487831_11721 | Not Available | Positive | 3126151 - 3126444 | 11064.4 |
| protein of unknown function | SAMN04487831_11722 | Not Available | Positive | 3126468 - 3127499 | 38713.0 |
| hypothetical protein | SAMN04487831_11723 | Not Available | Positive | 3127512 - 3127661 | 5741.07 |
| hypothetical protein | SAMN04487831_11724 | Not Available | Positive | 3127888 - 3129312 | 54015.1 |
| hypothetical protein | SAMN04487831_11725 | Not Available | Negative | 3129365 - 3129640 | 10191.5 |
| protein of unknown function | SAMN04487831_11726 | Not Available | Positive | 3129880 - 3131028 | 42747.2 |
| hypothetical protein | SAMN04487831_11727 | Not Available | Positive | 3131042 - 3131521 | 19093.8 |
| rep element-mobilizing transposase rayt | SAMN04487831_11728 | Not Available | Positive | 3131750 - 3132220 | 18374.4 |
| hypothetical protein | SAMN04487831_11729 | Not Available | Positive | 3132431 - 3133156 | 27727.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
