Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system protein vird4 | SAMN04487831_11710 | Not Available | Positive | 3114496 - 3116241 | 65709.3 |
| hypothetical protein | SAMN04487831_11711 | Not Available | Positive | 3116447 - 3117805 | 52376.0 |
| maff2 family protein | SAMN04487831_11712 | Not Available | Positive | 3118043 - 3118255 | 7058.84 |
| hypothetical protein | SAMN04487831_11713 | Not Available | Positive | 3118354 - 3119220 | 31791.7 |
| prgi family protein | SAMN04487831_11714 | Not Available | Positive | 3119234 - 3121756 | 95742.6 |
| nlpc/p60 family protein | SAMN04487831_11715 | Not Available | Positive | 3121756 - 3123105 | 50739.5 |
| protein of unknown function | SAMN04487831_11716 | Not Available | Positive | 3123114 - 3123392 | 10470.5 |
| protein of unknown function | SAMN04487831_11717 | Not Available | Positive | 3123373 - 3124068 | 25611.0 |
| mobilisation protein (mobc) | SAMN04487831_11718 | Not Available | Positive | 3124079 - 3124411 | 13158.2 |
| hypothetical protein | SAMN04487831_11719 | Not Available | Positive | 3124483 - 3124767 | 10170.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
