Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | SAMN04487831_11641 | Not Available | Positive | 3106443 - 3108008 | 60633.9 |
| dna replication protein dnac | SAMN04487831_11642 | Not Available | Positive | 3108023 - 3108814 | 29780.6 |
| Trna-ala | Not Available | Not Available | Positive | 3109372 - 3109447 | Not Available |
| Trna-trp | Not Available | Not Available | Positive | 3109612 - 3109682 | Not Available |
| hypothetical protein | SAMN04487831_1174 | Not Available | Positive | 3109929 - 3110993 | 39529.0 |
| replication initiator protein a (repa) n-terminus | SAMN04487831_1175 | Not Available | Positive | 3111027 - 3111929 | 35010.2 |
| chromosome partitioning protein | SAMN04487831_1176 | Not Available | Positive | 3111943 - 3112764 | 30283.8 |
| chromosome partitioning protein, parb family | SAMN04487831_1177 | Not Available | Positive | 3112724 - 3113662 | 35486.5 |
| hypothetical protein | SAMN04487831_1178 | Not Available | Positive | 3113782 - 3113931 | 5797.76 |
| protein of unknown function | SAMN04487831_1179 | Not Available | Positive | 3114020 - 3114499 | 18355.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
