Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | SAMN04487831_101271 | Not Available | Negative | 276808 - 277044 | 8568.21 |
| phosphate:acyl-[acyl carrier protein] acyltransferase | SAMN04487831_101272 | Not Available | Negative | 277048 - 278067 | 35916.9 |
| large subunit ribosomal protein l32 | SAMN04487831_101273 | Not Available | Negative | 278161 - 278340 | 6770.41 |
| uncharacterized protein | SAMN04487831_101274 | Not Available | Negative | 278342 - 278872 | 19529.2 |
| acetate kinase | SAMN04487831_101275 | Not Available | Negative | 278963 - 280159 | 42574.1 |
| predicted nucleotidyltransferase | SAMN04487831_101276 | Not Available | Positive | 280356 - 281525 | 43224.5 |
| Trna-glu | Not Available | Not Available | Positive | 281560 - 281634 | Not Available |
| udp-glucose 4-epimerase | SAMN04487831_101278 | Not Available | Negative | 281726 - 282742 | 37232.1 |
| lsu ribosomal protein l20p | SAMN04487831_101279 | Not Available | Negative | 282954 - 283313 | 13388.7 |
| lsu ribosomal protein l35p | SAMN04487831_101280 | Not Available | Negative | 283358 - 283555 | 7593.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
