Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase-3 subunit alpha | SAMN04487831_11455 | Not Available | Positive | 2974790 - 2978314 | 132366.0 |
| 6-phosphofructokinase | SAMN04487831_11456 | Not Available | Positive | 2978593 - 2979582 | 35712.8 |
| rna methyltransferase, trmh family | SAMN04487831_11457 | Not Available | Positive | 2979602 - 2980372 | 27382.9 |
| hypothetical protein | SAMN04487831_11458 | Not Available | Positive | 2980416 - 2980643 | 8917.22 |
| putative efflux protein, mate family | SAMN04487831_11459 | Not Available | Positive | 2980650 - 2982014 | 49754.6 |
| putative gtp pyrophosphokinase | SAMN04487831_11460 | Not Available | Positive | 2982097 - 2982795 | 26983.5 |
| undecaprenyl-diphosphatase | SAMN04487831_11461 | Not Available | Positive | 2982849 - 2983703 | 31247.6 |
| hypothetical protein | SAMN04487831_11462 | Not Available | Positive | 2983860 - 2986628 | 106367.0 |
| hypothetical protein | SAMN04487831_11463 | Not Available | Positive | 2986771 - 2987799 | 39273.4 |
| hypothetical protein | SAMN04487831_11464 | Not Available | Positive | 2987902 - 2988387 | 17887.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
