Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | SAMN04487831_11444 | Not Available | Positive | 2966497 - 2966727 | 8623.33 |
| hypothetical protein | SAMN04487831_11445 | Not Available | Negative | 2966782 - 2967456 | 24514.2 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | SAMN04487831_11446 | Not Available | Positive | 2967688 - 2968560 | 31379.6 |
| transcriptional regulator, gntr family | SAMN04487831_11447 | Not Available | Positive | 2968598 - 2969272 | 25692.0 |
| uncharacterized beta-barrel protein ywib, duf1934 family | SAMN04487831_11448 | Not Available | Positive | 2969276 - 2969686 | 15770.9 |
| thiamine transporter | SAMN04487831_11449 | Not Available | Negative | 2969729 - 2970301 | 20539.8 |
| gtp-binding protein hflx | SAMN04487831_11451 | Not Available | Positive | 2970541 - 2971773 | 45471.6 |
| phosphate:na+ symporter | SAMN04487831_11452 | Not Available | Positive | 2971921 - 2973543 | 59297.0 |
| hypothetical protein | SAMN04487831_11453 | Not Available | Positive | 2973675 - 2973893 | 8360.0 |
| hypothetical protein | SAMN04487831_11454 | Not Available | Positive | 2974008 - 2974709 | 25104.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
