Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_11434 | Not Available | Positive | 2955438 - 2956850 | 51205.4 |
| hypothetical protein | SAMN04487831_11435 | Not Available | Positive | 2956852 - 2957004 | 5624.55 |
| tola-binding protein | SAMN04487831_11436 | Not Available | Positive | 2957046 - 2958443 | 51927.3 |
| cytidine deaminase | SAMN04487831_11437 | Not Available | Positive | 2958490 - 2958897 | 14471.5 |
| basic membrane protein a | SAMN04487831_11438 | Not Available | Positive | 2958996 - 2960171 | 41198.9 |
| simple sugar transport system atp-binding protein | SAMN04487831_11439 | Not Available | Positive | 2960372 - 2961910 | 57294.6 |
| simple sugar transport system permease protein | SAMN04487831_11440 | Not Available | Positive | 2961910 - 2963055 | 40981.0 |
| simple sugar transport system permease protein | SAMN04487831_11441 | Not Available | Positive | 2963059 - 2964003 | 33425.8 |
| hdig domain-containing protein | SAMN04487831_11442 | Not Available | Positive | 2964028 - 2965125 | 41290.6 |
| fucose 4-o-acetylase | SAMN04487831_11443 | Not Available | Positive | 2965370 - 2966524 | 42955.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
