Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase | SAMN04487831_11424 | Not Available | Positive | 2942556 - 2943977 | 54626.2 |
| glycosyl transferase family 2 | SAMN04487831_11425 | Not Available | Positive | 2944042 - 2944926 | 33369.8 |
| rhamnosyltransferase | SAMN04487831_11426 | Not Available | Positive | 2944926 - 2945888 | 36842.8 |
| coa-binding domain-containing protein | SAMN04487831_11427 | Not Available | Positive | 2945898 - 2946761 | 33080.5 |
| hypothetical protein | SAMN04487831_11428 | Not Available | Positive | 2946763 - 2947557 | 29315.9 |
| hypothetical protein | SAMN04487831_11429 | Not Available | Negative | 2947601 - 2950024 | 88183.6 |
| hypothetical protein | SAMN04487831_11430 | Not Available | Negative | 2950024 - 2950638 | 23319.4 |
| hypothetical protein | SAMN04487831_11431 | Not Available | Negative | 2950651 - 2951409 | 28334.6 |
| valyl-trna synthetase | SAMN04487831_11432 | Not Available | Positive | 2951915 - 2954563 | 100992.0 |
| deoxyribose-phosphate aldolase | SAMN04487831_11433 | Not Available | Positive | 2954576 - 2955253 | 24050.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
