Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-antigen ligase like membrane protein | SAMN04487831_1144 | Not Available | Negative | 2920401 - 2921738 | 51390.5 |
| core-2/i-branching enzyme | SAMN04487831_1145 | Not Available | Negative | 2921752 - 2922636 | 35213.6 |
| capsular polysaccharide biosynthesis protein | SAMN04487831_1146 | Not Available | Positive | 2922877 - 2923590 | 25646.0 |
| capsular exopolysaccharide family | SAMN04487831_1147 | Not Available | Positive | 2923602 - 2924306 | 26123.3 |
| hypothetical protein | SAMN04487831_1148 | Not Available | Positive | 2924315 - 2925223 | 32116.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487831_1149 | Not Available | Positive | 2925254 - 2926384 | 42042.9 |
| glycosyl transferases group 1 | SAMN04487831_11410 | Not Available | Positive | 2926391 - 2928487 | 80384.8 |
| glycosyl transferase family 2 | SAMN04487831_11411 | Not Available | Positive | 2928492 - 2929538 | 40051.8 |
| glycosyl transferase family 2 | SAMN04487831_11412 | Not Available | Negative | 2929525 - 2930454 | 35187.8 |
| glycosyltransferase sugar-binding region containing dxd motif-containing protein | SAMN04487831_11413 | Not Available | Positive | 2930508 - 2931245 | 28422.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
