Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function duf58 | SAMN04487831_11372 | Not Available | Negative | 2908331 - 2909401 | 40912.3 |
| moxr-like atpase | SAMN04487831_11373 | Not Available | Negative | 2909429 - 2910364 | 34320.4 |
| condensation domain-containing protein | SAMN04487831_11374 | Not Available | Positive | 2910549 - 2911931 | 53389.8 |
| acyl carrier protein | SAMN04487831_11375 | Not Available | Positive | 2911944 - 2912183 | 9218.95 |
| long-chain acyl-coa synthetase | SAMN04487831_11376 | Not Available | Positive | 2912263 - 2913819 | 57916.7 |
| transcriptional regulator, tetr family | SAMN04487831_11377 | Not Available | Negative | 2913787 - 2914362 | 21808.0 |
| phosphoglucomutase | SAMN04487831_11378 | Not Available | Negative | 2914417 - 2916099 | 60460.3 |
| transposase dde domain-containing protein | SAMN04487831_11379 | Not Available | Negative | 2916332 - 2916592 | 10305.7 |
| hypothetical protein | SAMN04487831_1142 | Not Available | Negative | 2916931 - 2918739 | 66192.2 |
| hypothetical protein | SAMN04487831_1143 | Not Available | Negative | 2918840 - 2920210 | 49389.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
