Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_11362 | Not Available | Negative | 2898789 - 2899460 | 25284.9 |
| hypothetical protein | SAMN04487831_11363 | Not Available | Negative | 2899473 - 2900123 | 23679.5 |
| abc-2 type transport system atp-binding protein | SAMN04487831_11364 | Not Available | Negative | 2900127 - 2901005 | 32278.8 |
| dna-binding transcriptional regulator yhcf, gntr family | SAMN04487831_11365 | Not Available | Negative | 2901024 - 2901392 | 13978.1 |
| hypothetical protein | SAMN04487831_11366 | Not Available | Negative | 2901528 - 2902415 | 34560.0 |
| putative modulator of dna gyrase | SAMN04487831_11367 | Not Available | Positive | 2902604 - 2903335 | 26877.1 |
| sensor histidine kinase yesm | SAMN04487831_11368 | Not Available | Negative | 2903374 - 2904648 | 48115.6 |
| two component transcriptional regulator, lyttr family | SAMN04487831_11369 | Not Available | Negative | 2904817 - 2905536 | 27563.0 |
| hypothetical protein | SAMN04487831_11370 | Not Available | Negative | 2905588 - 2906049 | 17785.9 |
| transglutaminase-like superfamily protein | SAMN04487831_11371 | Not Available | Negative | 2906230 - 2908365 | 81415.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
