Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding protein ylmh, contains s4-like domain | SAMN04487831_11352 | Not Available | Positive | 2887118 - 2887885 | 28837.3 |
| lysophospholipase l1 | SAMN04487831_11353 | Not Available | Negative | 2887882 - 2888949 | 40058.9 |
| nad(p)h-hydrate epimerase | SAMN04487831_11354 | Not Available | Positive | 2889046 - 2890551 | 53377.4 |
| nad+ synthase | SAMN04487831_11355 | Not Available | Positive | 2890564 - 2891313 | 27663.9 |
| sgnh hydrolase-like domain-containing protein, acetyltransferase algx | SAMN04487831_11356 | Not Available | Negative | 2891310 - 2892596 | 48994.3 |
| alginate o-acetyltransferase complex protein algi | SAMN04487831_11357 | Not Available | Negative | 2892615 - 2894081 | 55009.3 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN04487831_11358 | Not Available | Negative | 2894083 - 2895180 | 42514.2 |
| uncharacterized protein | SAMN04487831_11359 | Not Available | Negative | 2895212 - 2895970 | 27340.2 |
| hypothetical protein | SAMN04487831_11360 | Not Available | Negative | 2895957 - 2897549 | 58847.8 |
| membrane protease subunit, stomatin/prohibitin family, contains c-terminal zn-ribbon domain | SAMN04487831_11361 | Not Available | Negative | 2897568 - 2898695 | 40020.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
