Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative sigma-54 modulation protein | SAMN04487831_11322 | Not Available | Negative | 2853342 - 2853875 | 20592.7 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04487831_11323 | Not Available | Positive | 2854141 - 2854872 | 25945.2 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN04487831_11324 | Not Available | Negative | 2855168 - 2856130 | 36740.2 |
| hypothetical protein | SAMN04487831_11325 | Not Available | Positive | 2856228 - 2857622 | 52835.7 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | SAMN04487831_11326 | Not Available | Positive | 2857606 - 2858895 | 47905.3 |
| hypothetical protein | SAMN04487831_11327 | Not Available | Positive | 2858915 - 2859187 | 10670.9 |
| oligopeptide transport system atp-binding protein | SAMN04487831_11328 | Not Available | Negative | 2859252 - 2860223 | 36438.0 |
| oligopeptide transport system atp-binding protein | SAMN04487831_11329 | Not Available | Negative | 2860237 - 2861085 | 31265.6 |
| peptide/nickel transport system permease protein | SAMN04487831_11330 | Not Available | Negative | 2861104 - 2861955 | 31251.6 |
| peptide/nickel transport system permease protein | SAMN04487831_11331 | Not Available | Negative | 2861959 - 2862909 | 35212.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
