Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid transport system substrate-binding protein | SAMN04487831_11312 | Not Available | Negative | 2843710 - 2844894 | 41640.3 |
| 16s rrna pseudouridine516 synthase | SAMN04487831_11313 | Not Available | Negative | 2844993 - 2845697 | 26118.5 |
| methionyl aminopeptidase | SAMN04487831_11314 | Not Available | Negative | 2845710 - 2846582 | 32140.3 |
| hypothetical protein | SAMN04487831_11315 | Not Available | Negative | 2846560 - 2847318 | 29046.2 |
| n-terminal domain of peptidoglycan hydrolase cwlo-containing protein | SAMN04487831_11316 | Not Available | Negative | 2847315 - 2848412 | 39171.9 |
| uncharacterized protein veg | SAMN04487831_11317 | Not Available | Negative | 2848571 - 2848810 | 9101.92 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN04487831_11318 | Not Available | Positive | 2849084 - 2849815 | 27308.0 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | SAMN04487831_11319 | Not Available | Negative | 2849807 - 2851186 | 50027.3 |
| d-alanine-d-alanine ligase | SAMN04487831_11320 | Not Available | Negative | 2851203 - 2852246 | 37819.4 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN04487831_11321 | Not Available | Negative | 2852351 - 2853247 | 35052.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
