Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gdp-l-fucose synthase | SAMN04487831_11274 | Not Available | Negative | 2821760 - 2822701 | 35381.2 |
| gdpmannose 4,6-dehydratase | SAMN04487831_11275 | Not Available | Negative | 2822720 - 2823760 | 39362.7 |
| glycosyltransferase family 10 (fucosyltransferase) c-term | SAMN04487831_11276 | Not Available | Negative | 2823790 - 2824827 | 40270.5 |
| hypothetical protein | SAMN04487831_11277 | Not Available | Negative | 2824824 - 2825669 | 33113.4 |
| abc transporter | SAMN04487831_11278 | Not Available | Negative | 2825691 - 2826962 | 47719.4 |
| lipopolysaccharide transport system permease protein | SAMN04487831_11279 | Not Available | Negative | 2826978 - 2827829 | 32148.2 |
| udpglucose 6-dehydrogenase | SAMN04487831_11280 | Not Available | Negative | 2827848 - 2829092 | 46364.8 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolysing) | SAMN04487831_11281 | Not Available | Negative | 2829173 - 2830318 | 43584.3 |
| hypothetical protein | SAMN04487831_11282 | Not Available | Negative | 2830426 - 2831676 | 47207.1 |
| transposase dde domain-containing protein | SAMN04487831_1131 | Not Available | Positive | 2832013 - 2833329 | 50733.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
