Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdp-glucose 4,6-dehydratase | SAMN04487831_11254 | Not Available | Negative | 2796598 - 2797644 | 38564.5 |
| acetyltransferase (gnat) domain-containing protein | SAMN04487831_11255 | Not Available | Negative | 2797792 - 2798292 | 19007.5 |
| hypothetical protein | SAMN04487831_11256 | Not Available | Negative | 2798709 - 2799329 | 23828.5 |
| acyltransferase family protein | SAMN04487831_11257 | Not Available | Negative | 2799313 - 2799603 | 11572.2 |
| hypothetical protein | SAMN04487831_11258 | Not Available | Positive | 2799850 - 2800407 | 21247.2 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487831_11259 | Not Available | Negative | 2800452 - 2801591 | 42943.0 |
| udp-glucose 4-epimerase | SAMN04487831_11260 | Not Available | Negative | 2801630 - 2802493 | 31392.9 |
| hypothetical protein | SAMN04487831_11261 | Not Available | Negative | 2802512 - 2804296 | 67761.4 |
| haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)e | SAMN04487831_11262 | Not Available | Negative | 2804324 - 2805943 | 61151.5 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | SAMN04487831_11263 | Not Available | Negative | 2805963 - 2807456 | 57753.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
