Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-glucose pyrophosphorylase | SAMN04487831_11234 | Not Available | Negative | 2780231 - 2780962 | 27691.0 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN04487831_11235 | Not Available | Negative | 2780995 - 2781633 | 24079.4 |
| hypothetical protein | SAMN04487831_11236 | Not Available | Negative | 2781636 - 2782136 | 19021.9 |
| iron/manganese superoxide dismutase, c-terminal domain | SAMN04487831_11237 | Not Available | Negative | 2782238 - 2782576 | 12694.1 |
| iron/manganese superoxide dismutase, alpha-hairpin domain | SAMN04487831_11238 | Not Available | Negative | 2782542 - 2782691 | 5655.64 |
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | SAMN04487831_11239 | Not Available | Negative | 2782896 - 2784869 | 74014.7 |
| hicb_like antitoxin of toxin-antitoxin system | SAMN04487831_11240 | Not Available | Negative | 2785028 - 2785453 | 16170.2 |
| mrna interferase hica | SAMN04487831_11241 | Not Available | Negative | 2785511 - 2785681 | 6382.91 |
| hypothetical protein | SAMN04487831_11242 | Not Available | Negative | 2785730 - 2786059 | 13044.5 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN04487831_11243 | Not Available | Negative | 2786068 - 2786706 | 23671.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
