Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coth protein | SAMN04487831_11214 | Not Available | Positive | 2758749 - 2760398 | 62992.7 |
| starch phosphorylase | SAMN04487831_11215 | Not Available | Negative | 2760418 - 2762667 | 85707.0 |
| arac-type dna-binding protein | SAMN04487831_11216 | Not Available | Positive | 2762773 - 2763645 | 33700.9 |
| abc-2 type transport system permease protein | SAMN04487831_11217 | Not Available | Negative | 2763550 - 2764689 | 42908.2 |
| abc-2 type transport system permease protein | SAMN04487831_11218 | Not Available | Negative | 2764686 - 2765972 | 47673.9 |
| abc-2 type transport system atp-binding protein | SAMN04487831_11219 | Not Available | Negative | 2765972 - 2766640 | 24693.3 |
| hypothetical protein | SAMN04487831_11220 | Not Available | Negative | 2766640 - 2767704 | 40992.0 |
| alginate o-acetyltransferase complex protein algi | SAMN04487831_11221 | Not Available | Negative | 2767713 - 2769236 | 58544.8 |
| o-acetylhomoserine (thiol)-lyase | SAMN04487831_11222 | Not Available | Positive | 2769367 - 2770641 | 45662.4 |
| transferase hexapeptide (six repeat-containing protein) | SAMN04487831_11223 | Not Available | Negative | 2770732 - 2771352 | 21823.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
