Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna nucleotidyltransferase (cca-adding enzyme) | SAMN04487831_11180 | Not Available | Negative | 2734715 - 2736040 | 49871.8 |
| prolyl-trna synthetase | SAMN04487831_11181 | Not Available | Negative | 2736042 - 2737481 | 54770.4 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04487831_11182 | Not Available | Negative | 2737599 - 2739881 | 88310.7 |
| 23s rrna pseudouridine1911/1915/1917 synthase | SAMN04487831_11183 | Not Available | Negative | 2739905 - 2740561 | 24472.9 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04487831_11184 | Not Available | Negative | 2740597 - 2741286 | 26256.7 |
| signal transduction histidine kinase | SAMN04487831_11185 | Not Available | Negative | 2741279 - 2742340 | 40147.5 |
| methionine adenosyltransferase | SAMN04487831_11186 | Not Available | Negative | 2742409 - 2742987 | 21289.5 |
| transposase dde domain-containing protein | SAMN04487831_1121 | Not Available | Negative | 2743137 - 2744453 | 50733.1 |
| methyl-accepting chemotaxis protein | SAMN04487831_1122 | Not Available | Positive | 2744836 - 2746833 | 71680.0 |
| inositol transport system substrate-binding protein | SAMN04487831_1123 | Not Available | Positive | 2746835 - 2747824 | 35300.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
