Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific recombinase xerd | SAMN04487831_11149 | Not Available | Negative | 2699352 - 2700422 | 41738.4 |
| hypothetical protein | SAMN04487831_11150 | Not Available | Negative | 2700434 - 2700631 | 7361.97 |
| transcriptional regulator, contains xre-family hth domain | SAMN04487831_11151 | Not Available | Positive | 2700829 - 2701329 | 18932.5 |
| elongation factor tu | SAMN04487831_11152 | Not Available | Negative | 2701519 - 2702706 | 43793.3 |
| elongation factor g | SAMN04487831_11153 | Not Available | Negative | 2702824 - 2704941 | 77877.0 |
| small subunit ribosomal protein s7 | SAMN04487831_11154 | Not Available | Negative | 2704957 - 2705427 | 17735.7 |
| ssu ribosomal protein s12p | SAMN04487831_11155 | Not Available | Negative | 2705572 - 2705991 | 15215.5 |
| dna-directed rna polymerase subunit beta' | SAMN04487831_11156 | Not Available | Negative | 2706165 - 2709839 | 136559.0 |
| dna-directed rna polymerase subunit beta | SAMN04487831_11157 | Not Available | Negative | 2709859 - 2713764 | 146240.0 |
| large subunit ribosomal protein l7/l12 | SAMN04487831_11158 | Not Available | Negative | 2713994 - 2714368 | 12931.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
