Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon starvation protein csta | SAMN04487831_1119 | Not Available | Negative | 2659998 - 2661476 | 53645.8 |
| methyl-accepting chemotaxis protein | SAMN04487831_11110 | Not Available | Negative | 2661622 - 2663673 | 75073.8 |
| hypothetical protein | SAMN04487831_11111 | Not Available | Negative | 2663863 - 2664225 | 12861.0 |
| uncharacterized protein family (upf0051) | SAMN04487831_11112 | Not Available | Negative | 2664356 - 2665279 | 32711.6 |
| fe-s cluster assembly atp-binding protein | SAMN04487831_11113 | Not Available | Negative | 2665279 - 2666019 | 26579.3 |
| lysophospholipase l1 | SAMN04487831_11114 | Not Available | Negative | 2666200 - 2667039 | 30987.2 |
| histidinol-phosphatase (php family) | SAMN04487831_11115 | Not Available | Positive | 2667161 - 2667937 | 30048.7 |
| two component transcriptional regulator, luxr family | SAMN04487831_11116 | Not Available | Negative | 2667952 - 2668590 | 23825.7 |
| signal transduction histidine kinase | SAMN04487831_11117 | Not Available | Negative | 2668591 - 2669610 | 37924.0 |
| abc-2 type transport system permease protein | SAMN04487831_11118 | Not Available | Negative | 2669600 - 2670763 | 43806.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
