Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lpxtg-motif cell wall anchor domain-containing protein | SAMN04487831_11099 | Not Available | Negative | 2650363 - 2652585 | 82029.1 |
| transposase dde domain-containing protein | SAMN04487831_110100 | Not Available | Negative | 2652846 - 2653136 | 11373.0 |
| hypothetical protein | SAMN04487831_1111 | Not Available | Negative | 2653137 - 2653321 | 7008.55 |
| xfp c-terminal domain-containing protein | SAMN04487831_1112 | Not Available | Negative | 2653524 - 2653961 | 17178.8 |
| adenosylhomocysteine nucleosidase | SAMN04487831_1113 | Not Available | Negative | 2653992 - 2654678 | 24332.6 |
| s-ribosylhomocysteine lyase /quorum-sensing autoinducer 2 (ai-2) synthesis protein luxs | SAMN04487831_1114 | Not Available | Negative | 2654692 - 2655153 | 17577.9 |
| 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis | SAMN04487831_1115 | Not Available | Negative | 2655167 - 2655718 | 19461.7 |
| dna-binding transcriptional regulator, merr family | SAMN04487831_1116 | Not Available | Negative | 2655772 - 2656602 | 32386.4 |
| para-nitrobenzyl esterase | SAMN04487831_1117 | Not Available | Positive | 2656749 - 2658446 | 60990.0 |
| mfs-type transporter involved in bile tolerance, atg22 family | SAMN04487831_1118 | Not Available | Negative | 2658490 - 2659815 | 47806.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
