Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heptaprenyl diphosphate synthase | SAMN04487831_11069 | Not Available | Negative | 2606382 - 2606882 | 17728.1 |
| hypothetical protein | SAMN04487831_11070 | Not Available | Negative | 2606893 - 2607270 | 14010.8 |
| thiamine biosynthesis lipoprotein | SAMN04487831_11071 | Not Available | Negative | 2607275 - 2608360 | 39618.3 |
| dmso/tmao reductase yedyz, heme-binding membrane subunit | SAMN04487831_11072 | Not Available | Negative | 2608357 - 2609460 | 39777.2 |
| hypothetical protein | SAMN04487831_11073 | Not Available | Negative | 2609460 - 2610611 | 41528.9 |
| hypothetical protein | SAMN04487831_11074 | Not Available | Positive | 2610838 - 2612625 | 65828.4 |
| nitroreductase family | SAMN04487831_11075 | Not Available | Negative | 2612665 - 2613483 | 30601.7 |
| flavodoxin domain-containing protein | SAMN04487831_11076 | Not Available | Negative | 2613486 - 2613875 | 13831.6 |
| alpha-n-arabinofuranosidase | SAMN04487831_11077 | Not Available | Negative | 2614055 - 2615575 | 57751.2 |
| arabinosaccharide transport system permease protein | SAMN04487831_11078 | Not Available | Negative | 2615625 - 2616494 | 31984.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
