Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| accessory sec system glycosylation protein gtfa | SAMN04487831_11059 | Not Available | Negative | 2596098 - 2597594 | 57499.3 |
| preprotein translocase subunit seca | SAMN04487831_11060 | Not Available | Negative | 2597591 - 2599939 | 88518.5 |
| accessory secretory protein asp3 | SAMN04487831_11061 | Not Available | Negative | 2599939 - 2600382 | 17451.6 |
| accessory secretory protein asp1 | SAMN04487831_11062 | Not Available | Negative | 2600386 - 2602011 | 63522.5 |
| preprotein translocase subunit secy | SAMN04487831_11063 | Not Available | Negative | 2602023 - 2603168 | 42523.9 |
| putative mn2+ efflux pump mntp | SAMN04487831_11064 | Not Available | Negative | 2603253 - 2603837 | 21326.1 |
| transcriptional regulator, tetr family | SAMN04487831_11065 | Not Available | Negative | 2603985 - 2604557 | 21945.7 |
| hypothetical protein | SAMN04487831_11066 | Not Available | Negative | 2604568 - 2604801 | 8875.57 |
| uncharacterized membrane protein hded, duf308 family | SAMN04487831_11067 | Not Available | Negative | 2604804 - 2605370 | 20038.7 |
| edd domain protein, degv family | SAMN04487831_11068 | Not Available | Negative | 2605437 - 2606324 | 33318.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
