Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system protein vird4 | SAMN04487831_11049 | Not Available | Negative | 2584505 - 2586250 | 65839.5 |
| protein of unknown function | SAMN04487831_11050 | Not Available | Negative | 2586247 - 2586726 | 18322.4 |
| chromosome partitioning protein, parb family | SAMN04487831_11051 | Not Available | Negative | 2586738 - 2587673 | 35512.2 |
| chromosome partitioning protein | SAMN04487831_11052 | Not Available | Negative | 2587630 - 2588454 | 29851.4 |
| replication initiator protein a (repa) n-terminus | SAMN04487831_11053 | Not Available | Negative | 2588464 - 2589393 | 35661.3 |
| hypothetical protein | SAMN04487831_11054 | Not Available | Negative | 2589521 - 2590564 | 38870.7 |
| hypothetical protein | SAMN04487831_11055 | Not Available | Negative | 2590684 - 2591175 | 19413.1 |
| helix-turn-helix domain-containing protein | SAMN04487831_11056 | Not Available | Negative | 2591282 - 2591617 | 12984.5 |
| pyruvate phosphate dikinase | SAMN04487831_11057 | Not Available | Negative | 2591943 - 2594582 | 96647.9 |
| accessory sec system glycosyltransferase gtfb | SAMN04487831_11058 | Not Available | Negative | 2594764 - 2596125 | 52544.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
