Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04487831_11039 | Not Available | Negative | 2573811 - 2574461 | 23769.4 |
| protein of unknown function | SAMN04487831_11040 | Not Available | Negative | 2574451 - 2574711 | 9888.58 |
| cell wall-associated hydrolase, nlpc family | SAMN04487831_11041 | Not Available | Negative | 2574721 - 2576034 | 49920.2 |
| type iv secretory pathway, virb4 component | SAMN04487831_11042 | Not Available | Negative | 2576035 - 2578548 | 96241.8 |
| hypothetical protein | SAMN04487831_11043 | Not Available | Negative | 2578561 - 2579427 | 31824.6 |
| maff2 family protein | SAMN04487831_11044 | Not Available | Negative | 2579521 - 2579781 | 8972.23 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN04487831_11045 | Not Available | Negative | 2580038 - 2580805 | 29580.5 |
| ribosomal protection tetracycline resistance protein | SAMN04487831_11046 | Not Available | Negative | 2580856 - 2582775 | 71290.0 |
| maff2 family protein | SAMN04487831_11047 | Not Available | Negative | 2583416 - 2583634 | 7885.97 |
| uncharacterized conserved protein, duf1697 family | SAMN04487831_11048 | Not Available | Negative | 2583848 - 2584375 | 20517.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
