Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sir2-like domain-containing protein | SAMN04487831_11019 | Not Available | Negative | 2560099 - 2562576 | 94791.1 |
| type ii restriction enzyme | SAMN04487831_11020 | Not Available | Negative | 2562603 - 2563481 | 33908.2 |
| site-specific dna-methyltransferase (adenine-specific) | SAMN04487831_11021 | Not Available | Negative | 2563468 - 2564250 | 29737.7 |
| dna adenine methylase | SAMN04487831_11022 | Not Available | Negative | 2564240 - 2565064 | 31968.0 |
| dna-binding transcriptional regulator, xre family | SAMN04487831_11023 | Not Available | Negative | 2565151 - 2565354 | 7791.65 |
| helix-turn-helix | SAMN04487831_11024 | Not Available | Positive | 2565563 - 2565784 | 8441.07 |
| hypothetical protein | SAMN04487831_11025 | Not Available | Positive | 2565853 - 2566377 | 20307.9 |
| dna methylase | SAMN04487831_11026 | Not Available | Negative | 2566400 - 2567152 | 28924.7 |
| helix-turn-helix | SAMN04487831_11027 | Not Available | Negative | 2567216 - 2567587 | 14168.9 |
| dna mismatch repair protein muth | SAMN04487831_11028 | Not Available | Positive | 2567784 - 2568452 | 26080.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
