Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-aminopeptidase/d-esterase | SAMN04487831_109103 | Not Available | Negative | 2525371 - 2526315 | 32790.6 |
| protein of unknown function | SAMN04487831_109104 | Not Available | Negative | 2526340 - 2527935 | 59763.6 |
| flotillin | SAMN04487831_109105 | Not Available | Negative | 2528085 - 2529593 | 54484.1 |
| cysteine protease, c1a family | SAMN04487831_109106 | Not Available | Negative | 2529690 - 2533361 | 139485.0 |
| hypothetical protein | SAMN04487831_109107 | Not Available | Negative | 2533461 - 2535737 | 88030.9 |
| hypothetical protein | SAMN04487831_109108 | Not Available | Negative | 2535887 - 2536792 | 34261.4 |
| sugar phosphate permease | SAMN04487831_109109 | Not Available | Negative | 2536819 - 2538216 | 51587.4 |
| uracil phosphoribosyltransferase | SAMN04487831_109110 | Not Available | Negative | 2538288 - 2538926 | 23427.7 |
| uracil permease | SAMN04487831_109111 | Not Available | Negative | 2538991 - 2540346 | 47731.5 |
| trax protein | SAMN04487831_109112 | Not Available | Negative | 2540438 - 2541190 | 28659.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
