Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator, arabinose operon transcriptional repressor | SAMN04487831_10993 | Not Available | Positive | 2512566 - 2513528 | 35649.1 |
| simple sugar transport system substrate-binding protein | SAMN04487831_10994 | Not Available | Negative | 2513536 - 2514546 | 37131.9 |
| two-component system, sensor histidine kinase yesm | SAMN04487831_10995 | Not Available | Negative | 2514539 - 2515984 | 54696.8 |
| two-component system, response regulator yesn | SAMN04487831_10996 | Not Available | Negative | 2515981 - 2517588 | 61043.1 |
| cytidylate kinase-like family protein | SAMN04487831_10997 | Not Available | Negative | 2517628 - 2518227 | 22938.3 |
| na+/h+ antiporter nhad | SAMN04487831_10998 | Not Available | Negative | 2518450 - 2519799 | 48738.0 |
| beta-glucosidase | SAMN04487831_10999 | Not Available | Negative | 2519877 - 2522624 | 102712.0 |
| methylenetetrahydrofolate reductase (nadph) | SAMN04487831_109100 | Not Available | Positive | 2522775 - 2523629 | 31815.3 |
| serine o-acetyltransferase | SAMN04487831_109101 | Not Available | Positive | 2523663 - 2524544 | 32596.1 |
| gluconate 5-dehydrogenase | SAMN04487831_109102 | Not Available | Negative | 2524581 - 2525360 | 27114.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
