Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04487831_10983 | Not Available | Negative | 2504028 - 2505317 | 48669.8 |
| hypothetical protein | SAMN04487831_10984 | Not Available | Negative | 2505360 - 2505608 | 9308.59 |
| hypothetical protein | SAMN04487831_10985 | Not Available | Negative | 2505605 - 2505733 | 4726.79 |
| hypothetical protein | SAMN04487831_10986 | Not Available | Negative | 2505730 - 2506410 | 26247.1 |
| hypothetical protein | SAMN04487831_10987 | Not Available | Negative | 2506549 - 2506683 | 4952.06 |
| hypothetical protein | SAMN04487831_10988 | Not Available | Negative | 2506708 - 2507052 | 13335.6 |
| simple sugar transport system permease protein | SAMN04487831_10989 | Not Available | Negative | 2507440 - 2508471 | 36602.5 |
| simple sugar transport system permease protein | SAMN04487831_10990 | Not Available | Negative | 2508471 - 2509535 | 36905.6 |
| simple sugar transport system atp-binding protein | SAMN04487831_10991 | Not Available | Negative | 2509535 - 2511049 | 55155.1 |
| simple sugar transport system substrate-binding protein | SAMN04487831_10992 | Not Available | Negative | 2511120 - 2512217 | 39166.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
