Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| edd domain protein, degv family | SAMN04487831_101221 | Not Available | Negative | 223941 - 224813 | 32179.8 |
| chaperonin groel | SAMN04487831_101222 | Not Available | Negative | 224906 - 226540 | 57528.1 |
| chaperonin groes | SAMN04487831_101223 | Not Available | Negative | 226576 - 226860 | 10158.4 |
| protein of unknown function | SAMN04487831_101224 | Not Available | Negative | 227038 - 228165 | 42182.8 |
| uncharacterized membrane protein hded, duf308 family | SAMN04487831_101225 | Not Available | Negative | 228175 - 228900 | 27096.1 |
| membrane protease ydil, caax protease family | SAMN04487831_101226 | Not Available | Negative | 228917 - 229555 | 23695.4 |
| phosphoglycolate phosphatase | SAMN04487831_101227 | Not Available | Negative | 229542 - 230195 | 24302.8 |
| dna gyrase subunit a | SAMN04487831_101228 | Not Available | Negative | 230192 - 232432 | 83194.3 |
| dna gyrase subunit b | SAMN04487831_101229 | Not Available | Negative | 232466 - 234391 | 71834.7 |
| dutp pyrophosphatase | SAMN04487831_101230 | Not Available | Negative | 234480 - 234917 | 15360.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
