Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small subunit ribosomal protein s11 | SAMN04487831_10953 | Not Available | Negative | 2487021 - 2487413 | 13752.7 |
| small subunit ribosomal protein s13 | SAMN04487831_10954 | Not Available | Negative | 2487449 - 2487817 | 13709.8 |
| translation initiation factor if-1 | SAMN04487831_10955 | Not Available | Negative | 2488273 - 2488491 | 8219.13 |
| hypothetical protein | SAMN04487831_10956 | Not Available | Negative | 2488484 - 2488750 | 10189.5 |
| methionine aminopeptidase, type i | SAMN04487831_10957 | Not Available | Negative | 2488741 - 2489541 | 29221.7 |
| adenylate kinase | SAMN04487831_10958 | Not Available | Negative | 2489543 - 2490187 | 23387.2 |
| protein translocase subunit secy/sec61 alpha | SAMN04487831_10959 | Not Available | Negative | 2490295 - 2491608 | 47518.3 |
| lsu ribosomal protein l15p | SAMN04487831_10960 | Not Available | Negative | 2491610 - 2492053 | 15690.8 |
| large subunit ribosomal protein l30 | SAMN04487831_10961 | Not Available | Negative | 2492071 - 2492256 | 6826.62 |
| small subunit ribosomal protein s5 | SAMN04487831_10962 | Not Available | Negative | 2492271 - 2492780 | 17930.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
