Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hpr(ser) kinase/phosphatase | SAMN04487831_10943 | Not Available | Negative | 2475177 - 2476112 | 35076.1 |
| excinuclease abc subunit c | SAMN04487831_10944 | Not Available | Negative | 2476169 - 2477965 | 68711.2 |
| cell division protease ftsh | SAMN04487831_10945 | Not Available | Negative | 2478023 - 2480032 | 73632.2 |
| putative abc transport system atp-binding protein | SAMN04487831_10946 | Not Available | Negative | 2480181 - 2480978 | 28906.1 |
| putative abc transport system permease protein | SAMN04487831_10947 | Not Available | Negative | 2480971 - 2481900 | 32410.8 |
| putative abc transport system substrate-binding protein | SAMN04487831_10948 | Not Available | Negative | 2481977 - 2483005 | 35780.6 |
| putative efflux protein, mate family | SAMN04487831_10949 | Not Available | Negative | 2483107 - 2484447 | 48349.9 |
| large subunit ribosomal protein l17 | SAMN04487831_10950 | Not Available | Negative | 2484629 - 2485153 | 19759.3 |
| dna-directed rna polymerase subunit alpha | SAMN04487831_10951 | Not Available | Negative | 2485295 - 2486254 | 35165.9 |
| small subunit ribosomal protein s4 | SAMN04487831_10952 | Not Available | Negative | 2486411 - 2487004 | 22874.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
