Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein, yigz family | SAMN04487831_10933 | Not Available | Negative | 2463310 - 2463963 | 23963.5 |
| penicillin-binding protein 1a | SAMN04487831_10934 | Not Available | Positive | 2464043 - 2466631 | 93548.4 |
| glutamine synthetase | SAMN04487831_10935 | Not Available | Negative | 2466692 - 2468812 | 78695.7 |
| fructose-bisphosphate aldolase, class ii | SAMN04487831_10936 | Not Available | Negative | 2468919 - 2469782 | 30499.8 |
| lipid kinase, yegs/rv2252/bmru family | SAMN04487831_10937 | Not Available | Negative | 2469857 - 2470750 | 32538.0 |
| catabolite repression hpr-like protein | SAMN04487831_10938 | Not Available | Negative | 2470772 - 2471020 | 8967.82 |
| hypothetical protein | SAMN04487831_10939 | Not Available | Negative | 2471062 - 2471904 | 31284.6 |
| upf0042 nucleotide-binding protein | SAMN04487831_10940 | Not Available | Negative | 2471905 - 2472777 | 33004.7 |
| udp-n-acetylmuramate dehydrogenase | SAMN04487831_10941 | Not Available | Negative | 2472774 - 2473709 | 33470.1 |
| aspartyl aminopeptidase | SAMN04487831_10942 | Not Available | Negative | 2473702 - 2475099 | 51209.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
