Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | SAMN04487831_1093 | Not Available | Negative | 2434839 - 2435534 | 25949.6 |
| n6-l-threonylcarbamoyladenine synthase | SAMN04487831_1094 | Not Available | Negative | 2435534 - 2436559 | 36734.9 |
| hypothetical protein | SAMN04487831_1095 | Not Available | Negative | 2436549 - 2437133 | 22698.9 |
| ribonuclease z | SAMN04487831_1096 | Not Available | Negative | 2437135 - 2438046 | 33718.8 |
| ribosomal-protein-alanine n-acetyltransferase | SAMN04487831_1097 | Not Available | Negative | 2438046 - 2438492 | 16840.9 |
| trna threonylcarbamoyladenosine biosynthesis protein tsab | SAMN04487831_1098 | Not Available | Negative | 2438492 - 2439202 | 25451.5 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | SAMN04487831_1099 | Not Available | Negative | 2439206 - 2439637 | 16153.0 |
| ycxb-like protein | SAMN04487831_10910 | Not Available | Negative | 2439634 - 2440131 | 19556.1 |
| uncharacterized protein | SAMN04487831_10911 | Not Available | Negative | 2440386 - 2442545 | 79648.9 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN04487831_10912 | Not Available | Negative | 2442555 - 2443604 | 40705.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
