Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| [fefe] hydrogenase, group b1/b3 | SAMN04487831_108106 | Not Available | Negative | 2421082 - 2422560 | 54115.4 |
| [fefe] hydrogenase h-cluster maturation gtpase hydf | SAMN04487831_108107 | Not Available | Negative | 2422599 - 2423783 | 43577.4 |
| 2-iminoacetate synthase | SAMN04487831_108108 | Not Available | Negative | 2423841 - 2425283 | 54630.2 |
| biotin synthase | SAMN04487831_108109 | Not Available | Negative | 2425288 - 2426352 | 40285.3 |
| hypothetical protein | SAMN04487831_108110 | Not Available | Negative | 2426909 - 2428951 | 72514.5 |
| two component transcriptional regulator, lyttr family | SAMN04487831_108111 | Not Available | Negative | 2429136 - 2429849 | 27294.9 |
| signal transduction histidine kinase | SAMN04487831_108112 | Not Available | Positive | 2430019 - 2432640 | 98564.8 |
| Trna-leu | Not Available | Not Available | Positive | 2432672 - 2432755 | Not Available |
| l-threonine aldolase | SAMN04487831_1091 | Not Available | Negative | 2433391 - 2434413 | 37618.8 |
| Trna-ser | Not Available | Not Available | Positive | 2434595 - 2434680 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
