Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative oligopeptide transporter, opt family | SAMN04487831_10886 | Not Available | Negative | 2400598 - 2402487 | 65145.9 |
| rubrerythrin | SAMN04487831_10887 | Not Available | Negative | 2402627 - 2403214 | 21921.8 |
| uncharacterized 2fe-2 and 4fe-4s clusters-containing protein, contains duf4445 domain | SAMN04487831_10888 | Not Available | Negative | 2403324 - 2404847 | 55811.7 |
| hypothetical protein | SAMN04487831_10889 | Not Available | Negative | 2404837 - 2405340 | 18695.9 |
| xtp/ditp diphosphohydrolase | SAMN04487831_10890 | Not Available | Negative | 2405321 - 2405932 | 22708.0 |
| n-acetylmuramoyl-l-alanine amidase | SAMN04487831_10891 | Not Available | Negative | 2405940 - 2407004 | 39045.4 |
| cysteine protease, c1a family | SAMN04487831_10892 | Not Available | Negative | 2407031 - 2408767 | 64128.4 |
| putative n6-adenine-specific dna methylase | SAMN04487831_10893 | Not Available | Negative | 2408771 - 2409919 | 43385.1 |
| two-component system, chemotaxis family, response regulator chey | SAMN04487831_10894 | Not Available | Negative | 2410220 - 2410603 | 14028.9 |
| hydrogenase expression/formation protein hype | SAMN04487831_10895 | Not Available | Negative | 2410752 - 2411738 | 34810.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
