Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04487831_10876 | Not Available | Negative | 2392815 - 2393489 | 25234.7 |
| dna-binding transcriptional regulator, merr family | SAMN04487831_10877 | Not Available | Negative | 2393508 - 2394200 | 26048.6 |
| muts domain v | SAMN04487831_10878 | Not Available | Negative | 2394178 - 2395698 | 58053.3 |
| hypothetical protein | SAMN04487831_10879 | Not Available | Negative | 2395751 - 2395999 | 9469.97 |
| hipa-like c-terminal domain-containing protein | SAMN04487831_10880 | Not Available | Negative | 2395996 - 2396754 | 29273.5 |
| helix-turn-helix | SAMN04487831_10881 | Not Available | Negative | 2396744 - 2397316 | 22369.1 |
| serpin b | SAMN04487831_10882 | Not Available | Negative | 2397356 - 2398651 | 48151.4 |
| hypothetical protein | SAMN04487831_10883 | Not Available | Negative | 2398672 - 2399583 | 33692.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487831_10884 | Not Available | Negative | 2399580 - 2400143 | 21864.2 |
| coenzyme pqq synthesis protein d (pqqd) | SAMN04487831_10885 | Not Available | Negative | 2400273 - 2400608 | 12812.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
