Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_10856 | Not Available | Positive | 2370161 - 2370415 | 10056.3 |
| nad(p)h-dependent flavin oxidoreductase yrpb, nitropropane dioxygenase family | SAMN04487831_10857 | Not Available | Positive | 2370549 - 2371625 | 38213.5 |
| cystathione beta-lyase | SAMN04487831_10858 | Not Available | Negative | 2371622 - 2372788 | 43924.3 |
| protein of unknown function | SAMN04487831_10859 | Not Available | Negative | 2372802 - 2373689 | 34212.1 |
| hypothetical protein | SAMN04487831_10860 | Not Available | Negative | 2373854 - 2373994 | 5136.29 |
| 2-dehydro-3-deoxygluconokinase | SAMN04487831_10861 | Not Available | Negative | 2374301 - 2375398 | 39863.4 |
| glucuronate isomerase | SAMN04487831_10862 | Not Available | Negative | 2375413 - 2376813 | 53610.9 |
| fructuronate reductase | SAMN04487831_10863 | Not Available | Negative | 2376810 - 2378306 | 56165.7 |
| mannonate dehydratase | SAMN04487831_10864 | Not Available | Negative | 2378311 - 2379384 | 40747.5 |
| 2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolase | SAMN04487831_10865 | Not Available | Negative | 2379384 - 2380025 | 22946.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
