Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endo-1,4-beta-xylanase | SAMN04487831_10835 | Not Available | Negative | 2350850 - 2352928 | 76217.0 |
| atp-dependent clp protease atp-binding subunit clpb | SAMN04487831_10836 | Not Available | Negative | 2353118 - 2355700 | 96333.4 |
| protein of unknown function | SAMN04487831_10837 | Not Available | Negative | 2355870 - 2357081 | 45691.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487831_10838 | Not Available | Negative | 2357098 - 2357607 | 20385.5 |
| 2-hydroxyglutaryl-coa dehydratase, d-component | SAMN04487831_10839 | Not Available | Negative | 2357824 - 2359365 | 59414.4 |
| benzoyl-coa reductase/2-hydroxyglutaryl-coa dehydratase subunit, bcrc/badd/hgdb | SAMN04487831_10840 | Not Available | Negative | 2359365 - 2360570 | 46486.7 |
| hypothetical protein | SAMN04487831_10841 | Not Available | Negative | 2360715 - 2361056 | 12908.5 |
| hypothetical protein | SAMN04487831_10842 | Not Available | Negative | 2361053 - 2361187 | 4904.09 |
| hypothetical protein | SAMN04487831_10843 | Not Available | Positive | 2361304 - 2362110 | 30486.8 |
| hypothetical protein | SAMN04487831_10844 | Not Available | Positive | 2362268 - 2362474 | 7556.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
