Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_10824 | Not Available | Negative | 2336581 - 2340711 | 153004.0 |
| beta-fructofuranosidase | SAMN04487831_10825 | Not Available | Negative | 2340724 - 2342211 | 56341.7 |
| transcriptional regulator, laci family | SAMN04487831_10826 | Not Available | Positive | 2342461 - 2343516 | 38756.4 |
| l-serine dehydratase | SAMN04487831_10827 | Not Available | Negative | 2343509 - 2344369 | 29714.8 |
| l-serine dehydratase | SAMN04487831_10828 | Not Available | Negative | 2344379 - 2345038 | 23264.1 |
| l-aspartate 1-decarboxylase | SAMN04487831_10829 | Not Available | Negative | 2345171 - 2345560 | 14086.9 |
| pantoate--beta-alanine ligase | SAMN04487831_10830 | Not Available | Negative | 2345577 - 2346434 | 31997.4 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | SAMN04487831_10831 | Not Available | Negative | 2346437 - 2347321 | 32072.8 |
| predicted oxidoreductase, contains short-chain dehydrogenase (sdr) and duf2520 domains | SAMN04487831_10832 | Not Available | Negative | 2347329 - 2348180 | 31049.0 |
| arabinoxylan arabinofuranohydrolase | SAMN04487831_10834 | Not Available | Negative | 2348411 - 2350768 | 84714.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
