Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| topoisomerase dna binding c4 zinc finger | SAMN04487831_10814 | Not Available | Positive | 2329645 - 2330433 | 30176.5 |
| hypothetical protein | SAMN04487831_10815 | Not Available | Negative | 2330674 - 2331003 | 11834.7 |
| hypothetical protein | SAMN04487831_10816 | Not Available | Negative | 2331215 - 2331418 | 7773.47 |
| hypothetical protein | SAMN04487831_10817 | Not Available | Negative | 2331364 - 2331501 | 4922.96 |
| fic/doc family protein | SAMN04487831_10818 | Not Available | Negative | 2331529 - 2332470 | 35814.1 |
| hypothetical protein | SAMN04487831_10819 | Not Available | Negative | 2332671 - 2333381 | 27079.1 |
| hypothetical protein | SAMN04487831_10820 | Not Available | Positive | 2333523 - 2333717 | 7719.56 |
| hypothetical protein | SAMN04487831_10821 | Not Available | Negative | 2333756 - 2334646 | 33626.8 |
| hypothetical protein | SAMN04487831_10822 | Not Available | Negative | 2334798 - 2335991 | 45604.0 |
| cro/c1-type hth dna-binding domain-containing protein | SAMN04487831_10823 | Not Available | Negative | 2335973 - 2336410 | 16603.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
