Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein mreb | SAMN04487831_107117 | Not Available | Positive | 2302549 - 2303532 | 34705.2 |
| flagellar basal-body rod protein flgg | SAMN04487831_107118 | Not Available | Positive | 2303658 - 2304461 | 29348.2 |
| flagellar basal-body rod protein flgg | SAMN04487831_107119 | Not Available | Positive | 2304473 - 2305291 | 29050.8 |
| flagellar protein flgj | SAMN04487831_107120 | Not Available | Positive | 2305341 - 2305796 | 16469.9 |
| exodeoxyribonuclease v alpha subunit | SAMN04487831_107121 | Not Available | Positive | 2305808 - 2308102 | 86088.6 |
| hdig domain-containing protein | SAMN04487831_107122 | Not Available | Negative | 2308086 - 2309276 | 44612.7 |
| s-adenosylmethionine synthetase | SAMN04487831_107123 | Not Available | Positive | 2309507 - 2310048 | 19154.8 |
| uncharacterised protein family (upf0236) | SAMN04487831_1081 | Not Available | Positive | 2310160 - 2311665 | 58500.3 |
| dipeptide/tripeptide permease | SAMN04487831_1082 | Not Available | Positive | 2312098 - 2313330 | 45006.0 |
| predicted oxidoreductase of the aldo/keto reductase family | SAMN04487831_1083 | Not Available | Negative | 2313353 - 2314402 | 39163.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
