Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stage v sporulation protein b | SAMN04487831_101201 | Not Available | Negative | 199321 - 201003 | 59808.2 |
| protein of unknown function | SAMN04487831_101202 | Not Available | Negative | 201011 - 202147 | 42607.7 |
| probable rrna maturation factor | SAMN04487831_101203 | Not Available | Negative | 202167 - 202664 | 18829.2 |
| hypothetical protein | SAMN04487831_101204 | Not Available | Negative | 202661 - 203854 | 45114.8 |
| phosphate starvation-inducible protein phoh | SAMN04487831_101205 | Not Available | Negative | 203867 - 204853 | 36511.2 |
| pyrimidine-nucleoside phosphorylase | SAMN04487831_101206 | Not Available | Negative | 204855 - 206159 | 46601.2 |
| 23s rrna (pseudouridine1915-n3)-methyltransferase | SAMN04487831_101207 | Not Available | Negative | 206179 - 206658 | 18244.2 |
| zinc-ribbon domain-containing protein | SAMN04487831_101208 | Not Available | Negative | 206881 - 208038 | 42816.5 |
| formate-tetrahydrofolate ligase | SAMN04487831_101209 | Not Available | Negative | 208041 - 209711 | 59737.2 |
| dna segregation atpase ftsk/spoiiie, s-dna-t family | SAMN04487831_101210 | Not Available | Negative | 209728 - 212460 | 99397.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
