Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | SAMN04487831_107107 | Not Available | Positive | 2288276 - 2289727 | 53730.1 |
| transcriptional regulator, laci family | SAMN04487831_107108 | Not Available | Positive | 2289872 - 2290861 | 36294.6 |
| arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein | SAMN04487831_107109 | Not Available | Positive | 2291015 - 2292298 | 45734.2 |
| carbohydrate abc transporter membrane protein 1, cut1 family (tc 3.a.1.1.-) | SAMN04487831_107110 | Not Available | Positive | 2292450 - 2293862 | 52941.8 |
| arabinogalactan oligomer / maltooligosaccharide transport system permease protein | SAMN04487831_107111 | Not Available | Positive | 2293862 - 2294704 | 31263.4 |
| protein of unknown function | SAMN04487831_107112 | Not Available | Positive | 2294889 - 2295149 | 9979.7 |
| alpha/beta hydrolase family protein | SAMN04487831_107113 | Not Available | Positive | 2295219 - 2295953 | 27551.1 |
| methyl-accepting chemotaxis protein | SAMN04487831_107114 | Not Available | Positive | 2296043 - 2297509 | 53488.5 |
| excinuclease abc subunit b | SAMN04487831_107115 | Not Available | Positive | 2297647 - 2299626 | 75564.1 |
| excinuclease abc subunit a | SAMN04487831_107116 | Not Available | Positive | 2299628 - 2302456 | 104946.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
