Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_10797 | Not Available | Positive | 2274137 - 2275222 | 40419.0 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04487831_10798 | Not Available | Positive | 2275621 - 2278662 | 117945.0 |
| transcriptional regulator, deor family | SAMN04487831_10799 | Not Available | Positive | 2278823 - 2279575 | 27691.4 |
| 1-phosphofructokinase | SAMN04487831_107100 | Not Available | Positive | 2279600 - 2280508 | 32517.1 |
| pts system, fructose-specific iic component | SAMN04487831_107101 | Not Available | Positive | 2280553 - 2282460 | 65657.9 |
| phosphocarrier protein | SAMN04487831_107102 | Not Available | Positive | 2282672 - 2282935 | 9219.22 |
| phosphotransferase system, enzyme i, ptsi | SAMN04487831_107103 | Not Available | Positive | 2282973 - 2284676 | 61552.4 |
| cation diffusion facilitator family transporter | SAMN04487831_107104 | Not Available | Positive | 2284798 - 2285937 | 41599.6 |
| nicotinate phosphoribosyltransferase | SAMN04487831_107105 | Not Available | Positive | 2285960 - 2287462 | 55796.3 |
| 16s rrna (guanine1516-n2)-methyltransferase | SAMN04487831_107106 | Not Available | Positive | 2287465 - 2288154 | 25760.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
