Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide pyruvyl transferase | SAMN04487831_10777 | Not Available | Positive | 2253576 - 2254625 | 40665.6 |
| coenzyme f420-reducing hydrogenase, beta subunit | SAMN04487831_10778 | Not Available | Positive | 2254650 - 2256167 | 57659.5 |
| methyltransferase, fkbm family | SAMN04487831_10779 | Not Available | Positive | 2256194 - 2257237 | 40014.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487831_10780 | Not Available | Positive | 2257288 - 2258718 | 55490.6 |
| glycosyl transferase family 2 | SAMN04487831_10781 | Not Available | Positive | 2258766 - 2260115 | 51984.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487831_10782 | Not Available | Positive | 2260272 - 2261471 | 46539.4 |
| hypothetical protein | SAMN04487831_10783 | Not Available | Positive | 2261472 - 2261624 | 6212.59 |
| protein of unknown function | SAMN04487831_10784 | Not Available | Positive | 2261578 - 2262030 | 16829.0 |
| hypothetical protein | SAMN04487831_10785 | Not Available | Positive | 2262049 - 2263005 | 36737.6 |
| 4fe-4s single cluster domain-containing protein | SAMN04487831_10786 | Not Available | Positive | 2263002 - 2264165 | 44837.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
