Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_10747 | Not Available | Positive | 2217315 - 2217737 | 15977.1 |
| transglutaminase-like superfamily protein | SAMN04487831_10748 | Not Available | Positive | 2217761 - 2218735 | 35356.7 |
| type iv pilus assembly protein pilc | SAMN04487831_10749 | Not Available | Positive | 2218747 - 2219799 | 38084.3 |
| hypothetical protein | SAMN04487831_10750 | Not Available | Positive | 2219801 - 2220157 | 13392.2 |
| protein of unknown function | SAMN04487831_10751 | Not Available | Positive | 2220176 - 2220721 | 20412.2 |
| hypothetical protein | SAMN04487831_10752 | Not Available | Positive | 2220711 - 2221091 | 14056.6 |
| hypothetical protein | SAMN04487831_10753 | Not Available | Positive | 2221112 - 2221480 | 13597.6 |
| twitching motility protein pilt | SAMN04487831_10754 | Not Available | Positive | 2221499 - 2222605 | 40912.2 |
| sulfate permease, sulp family | SAMN04487831_10755 | Not Available | Positive | 2222615 - 2224264 | 59629.6 |
| transcription-repair coupling factor | SAMN04487831_10756 | Not Available | Positive | 2224297 - 2227824 | 133692.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
